Demographic consequences of habitat loss and crowding in large carnivores: A natural experiment

Habitat loss is one of largest threats to the persistence of large carnivore populations. However, because most large carnivores are long‐lived, cryptic and wide‐ranging, few studies examine the demographic consequences of habitat loss, and the resultant crowding that ensues, on these species. We used long‐term data to examine the demographic responses of an African lion (Panthera leo) population to flooding‐induced habitat loss in a seasonal wetland, the Okavango Delta, during a transition from low to high annual flooding patterns. We found that intraspecific competition reduced cub survival and that this effect was exacerbated by habitat loss and consequent crowding. The proportion of cubs recorded in the population also declined as crowding increased, and both the survival of cubs and proportion of cubs recorded declined as prey abundance decreased. Apparent sub‐adult survival declined with increasing pride size, but this likely reflects emigration rather than mortality. Adult survival remained relatively constant throughout the study period, a population response which is important in buffering populations against short‐term fluctuations in ecological conditions. As many large carnivore populations face future habitat loss, it is important that we understand the demographic consequences of habitat loss in order to better mitigate its effects in the future.     

Habitat preferences and conservation of the marbled jewel beetle Poecilonota variolosa (Buprestidae)

Detailed knowledge on habitat requirements is a key to successful conservation actions. The marbled jewel beetle Poecilonota variolosa (Buprestidae) has a wide global distribution but populations are often scarce and typically fragmented. In Sweden it is monophagous on aspen Populus tremula and is classified as near threatened on the Swedish Red List due to its rapid population decline. This study aimed to investigate habitat preferences and regional-scale distribution patterns of P. variolosa in southern Sweden in order to suggest conservation measures. Aspen trees in four study areas in the province of Småland were surveyed for exit holes during late summer 2011. The occurrence and number of exit holes (both new and old ones) per tree were compared between study areas and habitat types, and were related to the sun exposure and bark thickness of individual trees. Further, the occurrence of new and older exit holes was related to tree sun exposure and bark thickness. The most preferred habitat types were aspens on clear-cuts, followed by roadside aspens, aspens in pastures, and aspens in closed forest. Thick bark and high sun exposure were consistently significant as predictors for both occurrence and number of new exit holes per tree. The majority of exit holes were located towards south. Our results indicate several useful management measures: to retain aspen on clear-cuts, to cut alongside roads and around some selected coarse aspens in closed forests and in pastures.     

The role of El Niño–Southern Oscillation in the dynamics of a savanna large herbivore population

Our understanding of large‐scale climatic phenomena and dynamics of large herbivore populations comes principally from research in northern regions with temperate, seasonal climate and animal communities with relatively low species diversity. To assess the generality of that perspective, we investigated effects of El Niño–Southern Oscillation (ENSO) on population dynamics of African buffalo Syncerus caffer inhabiting a semi‐arid savanna with variable rainfall. We used linear and nonlinear‐threshold models to investigate relationships between population parameters and explanatory variables affecting forage conditions (seasonal rainfall, Southern Oscillation Index [SOI]). El Niño‐related droughts in 1982–1983 and 1991–1992 were associated with strongly negative population change, a pattern expected to coincide with a decrease in normally high and constant adult survival. Consistent with that nonlinear pattern, we detected threshold relationships between wet‐season rainfall and population change. Juvenile recruitment was described best by linear relationships with dry‐season. Because ENSO operates primarily through wet‐season rainfall, whereas population dynamics were also related to dry‐season rainfall, SOI did not have the predictive ability of individual weather components.     

Scale-dependent selection of greenness by African elephants in the Kruger-private reserve transboundary region,South Africa

Foraging behaviour and habitat selection occur as hierarchical processes. Understanding the factors that govern foraging and habitat selection thus requires investigation of those processes over the scales at which they occur. We investigated patterns of habitat use by African elephants (Loxodonta africana) in relation to vegetation greenness to investigate the scale at which that landscape attribute was most closely related to distribution of elephant locations. We analysed Global Positioning System radio-collar locations for 15 individuals, using the Normalized Difference Vegetation Index as a representation of vegetation greenness in a Geographic Information Systems framework. We compared the importance of vegetation greenness at three spatial scales: the total home range, the seasonal home range and the 16-day home range. During the wet season, seasonal home ranges for both sexes were associated with intermediate greenness within the total home range; there was no evidence of selection based on greenness at finer scales. During the dry season, the strongest associations were within the 16-day home range: individual locations for males tended to be in areas of intermediate greenness, and those for females were in areas of intermediate and high greenness. Our findings suggest that the role of vegetation greenness varies with the scale of analysis, likely reflecting the hierarchical processes involved in habitat selection by elephants.     

Seasonal shifts in habitat use and diet by eland confined in a small fenced reserve

Large‐scale environmental changes create challenges for conservation of wildlife, particularly in fenced, insular protected areas where many wildlife populations persist. Moreover, large mammalian herbivores inhabiting spatially and temporally heterogeneous environments face the challenge of securing highly variable forage resources. Mixed feeders like the eland (Taurotragus oryx) can switch between browse and grass, but the cues that elicit that switch are not well understood. We investigated the seasonal diet shift of eland confined to a small fenced reserve and the role of greenness to elicit that shift. Eland changed from a diet in the wet season, consisting of grasses and browse found in woodland and grassland vegetation types, to a diet in the dry season dominated by the greenest browse species still available in woodland vegetation types, as greenness of dry season forage decreased. Our results suggest that eland switch from browsing to grazing in response to phenophase of the grass sward, which could explain the varying selection of grasses versus browse observed across the species range.     

A new monster from southwest Oregon forests: Cryptomaster behemoth sp. n. (Opiliones,Laniatores, Travunioidea)

The monotypic genus Cryptomaster Briggs, 1969 was described based on individuals from a single locality in southwestern Oregon. The described species Cryptomaster leviathan Briggs, 1969 was named for its large body size compared to most travunioid Laniatores. However, as the generic name suggests, Cryptomaster are notoriously difficult to find, and few subsequent collections have been recorded for this genus. Here, we increase sampling of Cryptomaster to 15 localities, extending their known range from the Coast Range northeast to the western Cascade Mountains of southern Oregon. Phylogenetic analyses of mitochondrial and nuclear DNA sequence data reveal deep phylogenetic breaks consistent with independently evolving lineages. We use discovery and validation species delimitation approaches to generate and test species hypotheses, including a coalescent species delimitation method to test multi-species hypotheses. For delimited species, we use light microscopy and SEM to discover diagnostic morphological characters. Although Cryptomaster has a small geographic distribution, this taxon is consistent with other short-range endemics in having deep phylogenetic breaks indicative of species level divergences. Herein we describe Cryptomaster behemoth sp. n., and provide morphological diagnostic characters for identifying Cryptomaster leviathan and Cryptomaster behemoth.     

Genetic diversification without obvious genitalic morphological divergence in harvestmen (Opiliones, Laniatores, Sclerobunus robustus) from montane sky islands of western North America

The southern Rocky Mountains and adjacent Intermontane Plateau Highlands region of western North America is a geographically diverse area with an active geologic history. Given the topological complexity and extensive geologic activity, organisms inhabiting this region are expected to show some degree of morphological and genetic divergence, especially populations found on the southern montane 'sky islands' of this region. Here we examine the phylogeographic history and diversification of a montane forest inhabiting harvestmen, Sclerobunus robustus, using a combination of genetic and morphological data. Divergence time estimates indicate that much of the diversification within and between major groups S. robustus predate the Pleistocene glacial cycles. The most widespread subspecies, Sclerobunus robustus robustus, is recovered as six genetically distinct, geographically cohesive mitochondrial phylogroups. Gene tree data for a single nuclear gene reveals congruent, albeit slightly more conservative, patterns of genetic divergence. Despite high levels of genetic divergence throughout their distribution, phylogroups show extreme conservation in somatic and reproductive morphology. This uncoupling of morphological and genetic differentiation may be due to morphological conservatism associated with a conserved microhabitat preference. Based on these data, it is obvious that S. robustus has undergone some level of cryptic diversification.     

MHC class II epitope nesting modulates dendritic cell function and improves generation of antigen-specific CD4 helper T cells

CD4 Th cells are critical to the development of coordinated immune responses to infections and tumors. Th cells are activated through interactions of the TCR with MHC class II complexed with peptide. T cell activation is dependent on the density of MHC peptide complexes as well as the duration of interaction of the TCR with APCs. In this study, we sought to determine whether MHC class II peptides could be modified with amino acid sequences that facilitated uptake and presentation with the goal of improving Th cell activation in vitro and in vivo. A model epitope derived from the murine folate receptor α, a self- and tumor Ag, was modified at its carboxyl terminus with the invariant chain-derived Ii-Key peptide and at its N terminus with a peptide that enhances uptake of Ag by APC. Modification of a peptide resulted in enhanced generation of high-avidity murine folate receptor α T cells that persisted in vivo and homed to sites of Ag deposition. The nesting approach was epitope and species independent and specifically excluded expansion of CD4 regulatory T cells. The resulting Th cells were therapeutic, enhanced in vivo helper activity and had an increased ability to resist tolerizing immune microenvironments. In addition to improved immunoadjuvants, this epitope modification strategy may be useful for enhancing ex vivo and in vivo generation of Th cells for preventing and treating diseases.     

Irod/Ian5: an inhibitor of gamma-radiation- and okadaic acid-induced apoptosis

Protein phosphatase-directed toxins such as okadaic acid (OA) are general apoptosis inducers. We show that a protein (inhibitor of radiation- and OA-induced apoptosis, Irod/Ian5), belonging to the family of immune-associated nucleotide binding proteins, protected Jurkat T-cells against OA- and gamma-radiation-induced apoptosis. Unlike previously described antiapoptotic proteins Irod/Ian5 did not protect against anti-Fas, tumor necrosis factor-alpha, staurosporine, UV-light, or a number of chemotherapeutic drugs. Irod antagonized a calmodulin-dependent protein kinase II-dependent step upstream of activation of caspase 3. Irod has predicted GTP-binding, coiled-coil, and membrane binding domains. Irod localized to the centrosomal/Golgi/endoplasmic reticulum compartment. Deletion of either the C-terminal membrane binding domain or the N-terminal GTP-binding domain did not affect the antiapoptotic function of Irod, nor the centrosomal localization. The middle part of Irod, containing the coiled-coil domain, was therefore responsible for centrosomal anchoring and resistance toward death. Being widely expressed and able to protect also nonimmune cells, the function of Irod may not be limited to the immune system. The function and localization of Irod indicate that the centrosome and calmodulin-dependent protein kinase II may have important roles in apoptosis signaling.